Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas sp. UW4 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere of common reeds |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Brassica napus, Medicago lupulina |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1236535 bp
Thymine Count
1233428 bp
Guanine Count
1854724 bp
Cytosine Count
1858701 bp
Genome Length
6183388 bp
Protein-coding Genes
5507 genes
Non-Coding Genes
98 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha/beta fold hydrolase | PPUTUW4_RS04180 | Q07646 | Positive | 971904 - 972806 | 34617.8 |
| sdr family oxidoreductase | PPUTUW4_RS04185 | P51660 | Positive | 973099 - 974010 | 32818.0 |
| n-acetylmuramoyl-l-alanine amidase | PPUTUW4_RS04190 | Not Available | Negative | 974085 - 974855 | 28617.7 |
| duf1302 domain-containing protein | PPUTUW4_RS04195 | Not Available | Positive | 975401 - 977194 | 63703.4 |
| duf1329 domain-containing protein | PPUTUW4_RS04200 | Not Available | Positive | 977218 - 978585 | 50849.3 |
| luxr c-terminal-related transcriptional regulator | PPUTUW4_RS04205 | Not Available | Positive | 978728 - 981274 | 94912.0 |
| iclr family transcriptional regulator | PPUTUW4_RS04210 | Not Available | Negative | 981344 - 982144 | 28235.8 |
| homogentisate 1,2-dioxygenase | PPUTUW4_RS04215 | Q3KHV3 | Positive | 982310 - 983614 | 47981.3 |
| fumarylacetoacetase | PPUTUW4_RS04220 | Q6H7M1 | Positive | 983618 - 984922 | 47100.0 |
| maleylacetoacetate isomerase | PPUTUW4_RS04225 | P57109 | Positive | 984935 - 985570 | 23479.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.




