Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas sp. UW4 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere of common reeds |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Brassica napus, Medicago lupulina |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1236535 bp
Thymine Count
1233428 bp
Guanine Count
1854724 bp
Cytosine Count
1858701 bp
Genome Length
6183388 bp
Protein-coding Genes
5507 genes
Non-Coding Genes
98 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1244 domain-containing protein | PPUTUW4_RS04130 | Not Available | Negative | 965215 - 965511 | 11284.2 |
| dihydroneopterin triphosphate 2'-epimerase | PPUTUW4_RS04135 | P0AC21 | Negative | 965608 - 965979 | 13842.8 |
| gtp cyclohydrolase i fole | PPUTUW4_RS04140 | Q887V1 | Negative | 965982 - 966542 | 20771.3 |
| dihydromonapterin reductase | PPUTUW4_RS04145 | A6T8N3 | Negative | 966563 - 967273 | 25486.5 |
| hypothetical protein | PPUTUW4_RS04150 | Not Available | Negative | 967445 - 968014 | 21156.6 |
| merr family transcriptional regulator | PPUTUW4_RS04155 | E1WH94 | Positive | 968238 - 969197 | 35669.4 |
| hypothetical protein | PPUTUW4_RS04160 | Not Available | Negative | 969201 - 969806 | 23189.5 |
| pas domain-containing protein | PPUTUW4_RS04165 | Not Available | Negative | 969867 - 970337 | 17393.5 |
| flavodoxin | PPUTUW4_RS04170 | Q9HYH1 | Positive | 970440 - 970895 | 16080.1 |
| class ii aldolase/adducin family protein | PPUTUW4_RS04175 | Q9HYH5 | Positive | 971122 - 971904 | 28203.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.




