Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas sp. UW4 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere of common reeds |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Brassica napus, Medicago lupulina |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1236535 bp
Thymine Count
1233428 bp
Guanine Count
1854724 bp
Cytosine Count
1858701 bp
Genome Length
6183388 bp
Protein-coding Genes
5507 genes
Non-Coding Genes
98 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf3565 domain-containing protein | PPUTUW4_RS04085 | Not Available | Negative | 957125 - 957451 | 12270.3 |
| peptidylprolyl isomerase | PPUTUW4_RS04090 | Q9KNX6 | Positive | 957420 - 957905 | 16956.8 |
| glutathione peroxidase | PPUTUW4_RS04095 | P06610 | Positive | 958028 - 958510 | 17584.0 |
| nadh:flavin oxidoreductase | PPUTUW4_RS04100 | C5H429 | Positive | 958709 - 959812 | 40264.0 |
| glycosyltransferase family 1 protein | PPUTUW4_RS04105 | P9WMY4 | Negative | 959932 - 961131 | 44296.3 |
| sulfate transporter cysz | PPUTUW4_RS04110 | Q3KHX7 | Negative | 961189 - 961941 | 28336.8 |
| thioredoxin-disulfide reductase | PPUTUW4_RS04115 | Q93HX6 | Positive | 962257 - 963213 | 33765.1 |
| aspartate aminotransferase family protein | PPUTUW4_RS04120 | P22256 | Negative | 963385 - 964635 | 44333.8 |
| glutamine synthetase | PPUTUW4_RS30585 | Not Available | Positive | 964763 - 964876 | 3723.55 |
| hopj type iii effector protein | PPUTUW4_RS04125 | Not Available | Negative | 964884 - 965222 | 11804.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.




