Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas sp. UW4 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere of common reeds |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Brassica napus, Medicago lupulina |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1236535 bp
Thymine Count
1233428 bp
Guanine Count
1854724 bp
Cytosine Count
1858701 bp
Genome Length
6183388 bp
Protein-coding Genes
5507 genes
Non-Coding Genes
98 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lipopolysaccharide transport periplasmic protein lpta | PPUTUW4_RS03985 | P0ADV3 | Negative | 937812 - 938360 | 19733.6 |
| lps export abc transporter periplasmic protein lptc | PPUTUW4_RS03990 | Not Available | Negative | 938347 - 938919 | 21648.8 |
| had family hydrolase | PPUTUW4_RS03995 | Q8ZB47 | Negative | 938927 - 939451 | 18984.0 |
| kpsf/gutq family sugar-phosphate isomerase | PPUTUW4_RS04000 | Q9HVW0 | Negative | 939451 - 940425 | 34406.1 |
| atp-binding cassette domain-containing protein | PPUTUW4_RS04005 | P63388 | Positive | 940701 - 941510 | 29546.1 |
| lipid asymmetry maintenance abc transporter permease subunit mlae | PPUTUW4_RS04010 | P45030 | Positive | 941510 - 942307 | 28445.2 |
| outer membrane lipid asymmetry maintenance protein mlad | PPUTUW4_RS04015 | P64605 | Positive | 942307 - 942774 | 16487.2 |
| phospholipid-binding protein mlac | PPUTUW4_RS04020 | Q9Z3Z9 | Positive | 942786 - 943439 | 23896.5 |
| lipid asymmetry maintenance protein mlab | PPUTUW4_RS04025 | Not Available | Positive | 943436 - 943741 | 10684.9 |
| bola family protein | PPUTUW4_RS04030 | Not Available | Positive | 943856 - 944095 | 8753.47 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.




