Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas sp. UW4 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere of common reeds |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Brassica napus, Medicago lupulina |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1236535 bp
Thymine Count
1233428 bp
Guanine Count
1854724 bp
Cytosine Count
1858701 bp
Genome Length
6183388 bp
Protein-coding Genes
5507 genes
Non-Coding Genes
98 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carbon-nitrogen hydrolase family protein | PPUTUW4_RS03935 | P0DP68 | Positive | 928881 - 929735 | 30604.4 |
| metalloprotease tldd | PPUTUW4_RS03940 | P0AGG9 | Positive | 929748 - 931190 | 50148.6 |
| ribosome biogenesis factor yjga | PPUTUW4_RS03945 | Q3KI17 | Negative | 931294 - 931818 | 20198.1 |
| metalloprotease pmba | PPUTUW4_RS03950 | P0AFK1 | Positive | 931927 - 933273 | 47840.6 |
| hpr family phosphocarrier protein | PPUTUW4_RS03955 | Q9HVV2 | Negative | 933340 - 933612 | 9647.78 |
| rnase adapter rapz | PPUTUW4_RS03960 | Q3KI09 | Negative | 933628 - 934485 | 32089.6 |
| pts iia-like nitrogen regulatory protein ptsn | PPUTUW4_RS03965 | Q9HVV4 | Negative | 934488 - 934952 | 16796.5 |
| ribosome hibernation-promoting factor, hpf/yfia family | PPUTUW4_RS03970 | P0A147 | Negative | 934965 - 935273 | 11606.0 |
| rna polymerase factor sigma-54 | PPUTUW4_RS03975 | P0A171 | Negative | 935348 - 936841 | 56544.8 |
| lps export abc transporter atp-binding protein | PPUTUW4_RS03980 | P45073 | Negative | 937087 - 937812 | 26539.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.




