Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas sp. UW4 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere of common reeds |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Brassica napus, Medicago lupulina |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1236535 bp
Thymine Count
1233428 bp
Guanine Count
1854724 bp
Cytosine Count
1858701 bp
Genome Length
6183388 bp
Protein-coding Genes
5507 genes
Non-Coding Genes
98 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna polymerase i | PPUTUW4_RS00350 | Q9HT80 | Positive | 70409 - 73213 | 102011.0 |
| ribosome biogenesis gtp-binding protein yiha/ysxc | PPUTUW4_RS00355 | Q3KKA7 | Negative | 73618 - 74262 | 23735.0 |
| cytochrome c5 family protein | PPUTUW4_RS00360 | Not Available | Positive | 74454 - 74744 | 10557.9 |
| cytochrome c | PPUTUW4_RS00365 | P00106 | Positive | 74790 - 75419 | 21509.6 |
| thiol:disulfide interchange protein dsba | PPUTUW4_RS00370 | O52376 | Positive | 75619 - 76260 | 23245.0 |
| endonuclease/exonuclease/phosphatase family protein | PPUTUW4_RS00375 | Not Available | Positive | 76275 - 77153 | 32544.3 |
| ggdef domain-containing protein | PPUTUW4_RS00380 | Not Available | Positive | 77150 - 79129 | 72787.1 |
| n-acetylmuramoyl-l-alanine amidase | PPUTUW4_RS00385 | P75820 | Positive | 79234 - 80013 | 28929.6 |
| eal domain-containing protein | PPUTUW4_RS00390 | Not Available | Positive | 80090 - 81706 | 60266.9 |
| atp-binding protein | PPUTUW4_RS00395 | O34206 | Negative | 81714 - 83504 | 65847.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.




