Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas sp. UW4 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere of common reeds |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Brassica napus, Medicago lupulina |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1236535 bp
Thymine Count
1233428 bp
Guanine Count
1854724 bp
Cytosine Count
1858701 bp
Genome Length
6183388 bp
Protein-coding Genes
5507 genes
Non-Coding Genes
98 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| septal ring lytic transglycosylase rlpa family protein | PPUTUW4_RS03880 | Q55752 | Negative | 915917 - 916291 | 13542.2 |
| asp-trna(asn)/glu-trna(gln) amidotransferase subunit gatb | PPUTUW4_RS03885 | Q3KI28 | Negative | 916440 - 917885 | 52894.3 |
| asp-trna(asn)/glu-trna(gln) amidotransferase subunit gata | PPUTUW4_RS03890 | Q3KI27 | Negative | 917896 - 919347 | 51646.5 |
| asp-trna(asn)/glu-trna(gln) amidotransferase subunit gatc | PPUTUW4_RS03895 | Q3KI26 | Negative | 919364 - 919651 | 10260.2 |
| rod shape-determining protein mreb | PPUTUW4_RS03900 | P0A9X5 | Positive | 919863 - 920900 | 37019.9 |
| rod shape-determining protein mrec | PPUTUW4_RS27605 | P44475 | Positive | 921044 - 922180 | 39830.4 |
| rod shape-determining protein mred | PPUTUW4_RS03915 | Not Available | Positive | 922180 - 922671 | 18270.3 |
| nucleoside triphosphate pyrophosphatase | PPUTUW4_RS03920 | Q3KI22 | Positive | 922704 - 923312 | 21505.6 |
| ribonuclease g | PPUTUW4_RS03925 | P0A9J2 | Positive | 923358 - 924815 | 54570.0 |
| yhdp family protein | PPUTUW4_RS03930 | Not Available | Positive | 924891 - 928694 | 137410.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.




