Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas sp. UW4 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere of common reeds |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Brassica napus, Medicago lupulina |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1236535 bp
Thymine Count
1233428 bp
Guanine Count
1854724 bp
Cytosine Count
1858701 bp
Genome Length
6183388 bp
Protein-coding Genes
5507 genes
Non-Coding Genes
98 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| response regulator transcription factor | PPUTUW4_RS03830 | O82868 | Positive | 903897 - 904457 | 20602.8 |
| abc transporter atp-binding protein/permease | PPUTUW4_RS03835 | Q57335 | Positive | 904555 - 906282 | 65672.9 |
| fadr/gntr family transcriptional regulator | PPUTUW4_RS03840 | Not Available | Positive | 906476 - 907225 | 27643.7 |
| 5-dehydro-4-deoxyglucarate dehydratase | PPUTUW4_RS03845 | Q3KI36 | Positive | 907650 - 908561 | 32572.1 |
| aldehyde dehydrogenase family protein | PPUTUW4_RS03850 | P42329 | Positive | 908623 - 910068 | 51245.0 |
| mfs transporter | PPUTUW4_RS03855 | P42237 | Positive | 910238 - 911605 | 49283.8 |
| galactarate dehydratase | PPUTUW4_RS03860 | P42240 | Positive | 911617 - 913170 | 56367.4 |
| aec family transporter | PPUTUW4_RS03865 | Not Available | Positive | 913330 - 914271 | 33408.7 |
| carboxymuconolactone decarboxylase family protein | PPUTUW4_RS03870 | P20370 | Negative | 914428 - 914808 | 13834.5 |
| calcium/sodium antiporter | PPUTUW4_RS03875 | Q0ZAI3 | Negative | 914805 - 915866 | 37561.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.




