Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas sp. UW4 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere of common reeds |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Brassica napus, Medicago lupulina |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1236535 bp
Thymine Count
1233428 bp
Guanine Count
1854724 bp
Cytosine Count
1858701 bp
Genome Length
6183388 bp
Protein-coding Genes
5507 genes
Non-Coding Genes
98 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | PPUTUW4_RS03785 | A0A0H2ZGN6 | Negative | 891375 - 892343 | 35052.0 |
| abc transporter permease subunit | PPUTUW4_RS03790 | A0A0H2ZFV0 | Negative | 892354 - 893265 | 32455.8 |
| abc transporter permease subunit | PPUTUW4_RS03795 | A0A0H2ZGW7 | Negative | 893276 - 894286 | 37105.5 |
| abc transporter substrate-binding protein | PPUTUW4_RS03800 | A0A0H2ZGV7 | Negative | 894360 - 895955 | 59048.2 |
| oprd family porin | PPUTUW4_RS03805 | Not Available | Negative | 896034 - 897467 | 51838.7 |
| abc transporter substrate-binding protein | PPUTUW4_RS03810 | A0A0H2ZGV2 | Negative | 897640 - 899241 | 59342.5 |
| abc transporter substrate-binding protein | PPUTUW4_RS03815 | Not Available | Negative | 899545 - 901170 | 60554.0 |
| simpl domain-containing protein | PPUTUW4_RS03820 | Not Available | Negative | 901618 - 902334 | 25630.8 |
| glutamine synthetase | PPUTUW4_RS30110 | Not Available | Positive | 902442 - 902555 | 4021.01 |
| atp-binding protein | PPUTUW4_RS03825 | P0C0Z0 | Positive | 902642 - 903904 | 46806.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.




