Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas sp. UW4 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere of common reeds |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Brassica napus, Medicago lupulina |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1236535 bp
Thymine Count
1233428 bp
Guanine Count
1854724 bp
Cytosine Count
1858701 bp
Genome Length
6183388 bp
Protein-coding Genes
5507 genes
Non-Coding Genes
98 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type iii plp-dependent enzyme | PPUTUW4_RS03735 | P27121 | Negative | 879456 - 880619 | 43398.0 |
| betaine/proline/choline family abc transporter atp-binding protein | PPUTUW4_RS03740 | Q8ZPK4 | Negative | 881275 - 882432 | 43114.1 |
| abc transporter permease | PPUTUW4_RS03745 | Q8ZPK3 | Negative | 882429 - 883082 | 22836.2 |
| glycine betaine abc transporter substrate-binding protein | PPUTUW4_RS03750 | Q9HXC4 | Negative | 883095 - 883988 | 33014.4 |
| abc transporter permease | PPUTUW4_RS03755 | Q8ZPK1 | Negative | 884009 - 884698 | 24033.6 |
| peptide chain release factor 3 | PPUTUW4_RS03760 | Q3KI56 | Positive | 885255 - 886838 | 59730.5 |
| mfs transporter | PPUTUW4_RS03765 | Not Available | Positive | 887045 - 888280 | 45081.2 |
| hypothetical protein | PPUTUW4_RS03770 | Not Available | Positive | 888427 - 888681 | 8883.04 |
| delta-60 repeat domain-containing protein | PPUTUW4_RS03775 | Not Available | Negative | 888868 - 890064 | 42146.9 |
| peptide abc transporter atp-binding protein | PPUTUW4_RS03780 | A0A0H2ZH52 | Negative | 890395 - 891375 | 36057.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.




