Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas sp. UW4 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere of common reeds |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Brassica napus, Medicago lupulina |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1236535 bp
Thymine Count
1233428 bp
Guanine Count
1854724 bp
Cytosine Count
1858701 bp
Genome Length
6183388 bp
Protein-coding Genes
5507 genes
Non-Coding Genes
98 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphoenolpyruvate--protein phosphotransferase | PPUTUW4_RS03685 | P23388 | Positive | 861785 - 864646 | 101887.0 |
| 1-phosphofructokinase | PPUTUW4_RS03690 | Q9KM71 | Positive | 864646 - 865587 | 32664.2 |
| pts fructose-like transporter subunit iib | PPUTUW4_RS03695 | Q9KM72 | Positive | 865599 - 867338 | 59659.9 |
| alkaline phosphatase | PPUTUW4_RS03700 | Q8KRU5 | Positive | 867433 - 869022 | 59329.9 |
| alpha-xenorhabdolysin family binary toxin subunit a | PPUTUW4_RS03705 | Not Available | Positive | 869306 - 871552 | 83372.9 |
| hypothetical protein | PPUTUW4_RS03710 | Not Available | Positive | 871658 - 872557 | 34148.8 |
| sulfite reductase flavoprotein subunit alpha | PPUTUW4_RS03715 | A0KTH4 | Negative | 872596 - 875124 | 93112.9 |
| tonb-dependent siderophore receptor | PPUTUW4_RS03720 | P81549 | Negative | 875384 - 877708 | 83169.1 |
| fe2+-dependent dioxygenase | PPUTUW4_RS03725 | Q3KI64 | Positive | 877916 - 878596 | 25480.5 |
| tetratricopeptide repeat protein | PPUTUW4_RS03730 | Not Available | Positive | 878597 - 879355 | 27821.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.




