Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas sp. UW4 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere of common reeds |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Brassica napus, Medicago lupulina |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1236535 bp
Thymine Count
1233428 bp
Guanine Count
1854724 bp
Cytosine Count
1858701 bp
Genome Length
6183388 bp
Protein-coding Genes
5507 genes
Non-Coding Genes
98 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| polyribonucleotide nucleotidyltransferase | PPUTUW4_RS03635 | Q3KI80 | Positive | 849571 - 851676 | 74795.1 |
| Trna-thr | Not Available | Not Available | Positive | 851816 - 851891 | Not Available |
| duf6388 family protein | PPUTUW4_RS03645 | Not Available | Positive | 852253 - 852558 | 11945.8 |
| carboxylating nicotinate-nucleotide diphosphorylase | PPUTUW4_RS03650 | P30819 | Negative | 852621 - 853469 | 30275.6 |
| duf1631 domain-containing protein | PPUTUW4_RS03655 | Not Available | Positive | 853734 - 855911 | 80931.2 |
| 1,6-anhydro-n-acetylmuramyl-l-alanine amidase ampd | PPUTUW4_RS03660 | P13016 | Positive | 855974 - 856534 | 20638.1 |
| regulatory signaling modulator protein ampe | PPUTUW4_RS03665 | Not Available | Positive | 856531 - 857367 | 30853.2 |
| methyl-accepting chemotaxis protein | PPUTUW4_RS03670 | Not Available | Positive | 857572 - 859602 | 73066.1 |
| tatd family hydrolase | PPUTUW4_RS03675 | P39408 | Negative | 859719 - 860495 | 28735.6 |
| catabolite repressor/activator | PPUTUW4_RS03680 | Q9KM69 | Negative | 860499 - 861494 | 36495.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.




