Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas sp. UW4 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere of common reeds |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Brassica napus, Medicago lupulina |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1236535 bp
Thymine Count
1233428 bp
Guanine Count
1854724 bp
Cytosine Count
1858701 bp
Genome Length
6183388 bp
Protein-coding Genes
5507 genes
Non-Coding Genes
98 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| triose-phosphate isomerase | PPUTUW4_RS03585 | Q3KI88 | Positive | 841378 - 842133 | 25891.3 |
| preprotein translocase subunit secg | PPUTUW4_RS27600 | P95577 | Positive | 842138 - 842521 | 13027.7 |
| Trna-leu | Not Available | Not Available | Positive | 842544 - 842629 | Not Available |
| Trna-met | Not Available | Not Available | Positive | 842727 - 842803 | Not Available |
| ribosome maturation factor rimp | PPUTUW4_RS03605 | C3K261 | Positive | 842942 - 843400 | 17029.5 |
| transcription termination factor nusa | PPUTUW4_RS03610 | P0AFF8 | Positive | 843460 - 844941 | 54443.8 |
| translation initiation factor if-2 | PPUTUW4_RS03615 | Q3KI84 | Positive | 844969 - 847494 | 90710.5 |
| 30s ribosome-binding factor rbfa | PPUTUW4_RS03620 | Q3KI83 | Positive | 847654 - 848055 | 14966.0 |
| trna pseudouridine(55) synthase trub | PPUTUW4_RS03625 | Q3KI82 | Positive | 848059 - 848976 | 33444.1 |
| 30s ribosomal protein s15 | PPUTUW4_RS03630 | C3K256 | Positive | 849095 - 849364 | 10053.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.




