Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas sp. UW4 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere of common reeds |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Brassica napus, Medicago lupulina |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1236535 bp
Thymine Count
1233428 bp
Guanine Count
1854724 bp
Cytosine Count
1858701 bp
Genome Length
6183388 bp
Protein-coding Genes
5507 genes
Non-Coding Genes
98 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 4-hydroxy-tetrahydrodipicolinate reductase | PPUTUW4_RS03535 | Q4ZNP9 | Positive | 829481 - 830284 | 28310.2 |
| glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit | PPUTUW4_RS03540 | Q88DU5 | Positive | 830544 - 831680 | 40605.3 |
| carbamoyl-phosphate synthase large subunit | PPUTUW4_RS03545 | Q87WP4 | Positive | 831798 - 835019 | 117351.0 |
| transcription elongation factor grea | PPUTUW4_RS03550 | Q87WP5 | Positive | 835022 - 835498 | 17331.7 |
| hypothetical protein | PPUTUW4_RS03555 | Not Available | Positive | 835527 - 835931 | 14816.8 |
| yhby family rna-binding protein | PPUTUW4_RS03560 | P95453 | Negative | 835941 - 836249 | 11529.3 |
| 23s rrna (uridine(2552)-2'-o)-methyltransferase rlme | PPUTUW4_RS03565 | Q4KIG3 | Positive | 836355 - 836987 | 23547.4 |
| atp-dependent zinc metalloprotease ftsh | PPUTUW4_RS03570 | P63344 | Positive | 837187 - 839097 | 69001.3 |
| dihydropteroate synthase | PPUTUW4_RS03575 | P0AC14 | Positive | 839106 - 839957 | 30151.5 |
| phosphoglucosamine mutase | PPUTUW4_RS03580 | Q3KI89 | Positive | 839974 - 841311 | 47600.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.




