Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas sp. UW4 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere of common reeds |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Brassica napus, Medicago lupulina |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1236535 bp
Thymine Count
1233428 bp
Guanine Count
1854724 bp
Cytosine Count
1858701 bp
Genome Length
6183388 bp
Protein-coding Genes
5507 genes
Non-Coding Genes
98 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ssra-binding protein smpb | PPUTUW4_RS03485 | Q3KIA8 | Negative | 819511 - 819993 | 18299.2 |
| sodium-dependent transporter | PPUTUW4_RS03490 | O07577 | Positive | 820112 - 821515 | 50601.0 |
| type ii toxin-antitoxin system rata family toxin | PPUTUW4_RS03495 | O68560 | Positive | 821523 - 821957 | 15820.0 |
| rnfh family protein | PPUTUW4_RS03500 | Q3KIA5 | Positive | 821950 - 822264 | 11157.6 |
| outer membrane protein assembly factor bame | PPUTUW4_RS03505 | O68564 | Negative | 822327 - 822854 | 19168.9 |
| ferric iron uptake transcriptional regulator | PPUTUW4_RS03510 | Q52083 | Positive | 822952 - 823356 | 15359.5 |
| dna repair protein recn | PPUTUW4_RS03515 | A5F379 | Negative | 823550 - 825223 | 61120.5 |
| nucleotide exchange factor grpe | PPUTUW4_RS03520 | Q4KIH2 | Positive | 825464 - 826030 | 20737.4 |
| molecular chaperone dnak | PPUTUW4_RS03525 | Q3KIA0 | Positive | 826133 - 828049 | 68493.5 |
| molecular chaperone dnaj | PPUTUW4_RS03530 | Q4KIH0 | Positive | 828346 - 829470 | 40287.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.




