Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas sp. UW4 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere of common reeds |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Brassica napus, Medicago lupulina |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1236535 bp
Thymine Count
1233428 bp
Guanine Count
1854724 bp
Cytosine Count
1858701 bp
Genome Length
6183388 bp
Protein-coding Genes
5507 genes
Non-Coding Genes
98 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| integrase domain-containing protein | PPUTUW4_RS03440 | P32053 | Negative | 807916 - 809172 | 47936.0 |
| Tmrna,resume consensus sequence (at 90): tatagttgccaatgacga | Not Available | Not Available | Positive | 809361 - 809754 | Not Available |
| hypothetical protein | PPUTUW4_RS03445 | Not Available | Negative | 809849 - 810127 | 9643.53 |
| hypothetical protein | PPUTUW4_RS03450 | Not Available | Negative | 810301 - 810576 | 9669.59 |
| fad-binding and (fe-s)-binding domain-containing protein | PPUTUW4_RS03455 | Q86WU2 | Negative | 810766 - 813576 | 102306.0 |
| lactate utilization protein c | PPUTUW4_RS03460 | Q9JYT7 | Negative | 813573 - 814244 | 24953.9 |
| lutb/lldf family l-lactate oxidation iron-sulfur protein | PPUTUW4_RS03465 | B7JF01 | Negative | 814244 - 815698 | 53496.5 |
| (fe-s)-binding protein | PPUTUW4_RS03470 | Q9KBU2 | Negative | 815695 - 816519 | 30258.1 |
| lactate permease lctp family transporter | PPUTUW4_RS03475 | Q46839 | Negative | 816671 - 818365 | 59612.1 |
| gntr family transcriptional regulator | PPUTUW4_RS03480 | P0A2S3 | Positive | 818627 - 819394 | 28901.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.




