Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas sp. UW4 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere of common reeds |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Brassica napus, Medicago lupulina |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1236535 bp
Thymine Count
1233428 bp
Guanine Count
1854724 bp
Cytosine Count
1858701 bp
Genome Length
6183388 bp
Protein-coding Genes
5507 genes
Non-Coding Genes
98 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methionine abc transporter permease | PPUTUW4_RS00300 | Not Available | Negative | 61004 - 61678 | 23931.3 |
| methionine abc transporter atp-binding protein | PPUTUW4_RS00305 | Q3KK97 | Negative | 61678 - 62685 | 36567.1 |
| catalase hpii | PPUTUW4_RS00310 | P95539 | Positive | 62896 - 65034 | 78461.8 |
| pa5502 family lipoprotein | PPUTUW4_RS00315 | Not Available | Negative | 65156 - 65872 | 25596.8 |
| zinc abc transporter permease subunit znub | PPUTUW4_RS00320 | P39832 | Negative | 65910 - 66698 | 27234.8 |
| zinc abc transporter atp-binding protein znuc | PPUTUW4_RS00325 | Q3KKA1 | Negative | 66691 - 67476 | 28125.3 |
| zinc uptake transcriptional repressor zur | PPUTUW4_RS00330 | P0AC51 | Negative | 67476 - 67958 | 17406.0 |
| zinc abc transporter substrate-binding protein | PPUTUW4_RS00335 | P39172 | Positive | 68025 - 68945 | 33384.0 |
| homoserine kinase | PPUTUW4_RS00340 | B7V732 | Negative | 69036 - 69986 | 35097.5 |
| duf2782 domain-containing protein | PPUTUW4_RS00345 | Not Available | Negative | 70044 - 70334 | 10772.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.




