Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas sp. UW4 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere of common reeds |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Brassica napus, Medicago lupulina |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1236535 bp
Thymine Count
1233428 bp
Guanine Count
1854724 bp
Cytosine Count
1858701 bp
Genome Length
6183388 bp
Protein-coding Genes
5507 genes
Non-Coding Genes
98 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PPUTUW4_RS03350 | Not Available | Positive | 769325 - 769567 | 8659.97 |
| duf726 domain-containing protein | PPUTUW4_RS03355 | Not Available | Negative | 769749 - 771215 | 53871.7 |
| hypothetical protein | PPUTUW4_RS03360 | Not Available | Negative | 771393 - 772049 | 23791.4 |
| dead/deah box helicase | PPUTUW4_RS03365 | A8G9P6 | Positive | 772583 - 775447 | 107345.0 |
| eco57i restriction-modification methylase domain-containing protein | PPUTUW4_RS03370 | Not Available | Positive | 775462 - 780375 | 183410.0 |
| duf262 domain-containing protein | PPUTUW4_RS03375 | Not Available | Positive | 780455 - 782239 | 67270.7 |
| dead/deah box helicase | PPUTUW4_RS03380 | P0DW38 | Positive | 782245 - 788577 | 233764.0 |
| uvrd-helicase domain-containing protein | PPUTUW4_RS03385 | Not Available | Positive | 788574 - 790673 | 78180.7 |
| hypothetical protein | PPUTUW4_RS03390 | Not Available | Negative | 790800 - 791108 | 12174.8 |
| integrase domain-containing protein | PPUTUW4_RS03395 | Not Available | Negative | 791105 - 792085 | 36350.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.




