Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas sp. UW4 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere of common reeds |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Brassica napus, Medicago lupulina |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1236535 bp
Thymine Count
1233428 bp
Guanine Count
1854724 bp
Cytosine Count
1858701 bp
Genome Length
6183388 bp
Protein-coding Genes
5507 genes
Non-Coding Genes
98 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1329 domain-containing protein | PPUTUW4_RS03190 | Not Available | Positive | 729881 - 731254 | 51160.4 |
| fita-like ribbon-helix-helix domain-containing protein | PPUTUW4_RS03195 | Not Available | Positive | 731349 - 731594 | 8875.56 |
| type ii toxin-antitoxin system vapc family toxin | PPUTUW4_RS03200 | P55511 | Positive | 731591 - 732010 | 14972.9 |
| methyl-accepting chemotaxis protein | PPUTUW4_RS03205 | Q88E10 | Negative | 732135 - 734054 | 68614.3 |
| histidine phosphatase family protein | PPUTUW4_RS03210 | Not Available | Positive | 734315 - 734986 | 24331.7 |
| phosphatase pap2 family protein | PPUTUW4_RS03215 | Not Available | Positive | 735018 - 735863 | 32538.7 |
| duf2252 domain-containing protein | PPUTUW4_RS03220 | Not Available | Negative | 735956 - 737362 | 52986.7 |
| duf6124 family protein | PPUTUW4_RS03225 | Not Available | Negative | 737478 - 737828 | 12549.8 |
| helix-turn-helix domain-containing protein | PPUTUW4_RS03230 | Not Available | Positive | 738244 - 738495 | 9165.23 |
| cysteine hydrolase family protein | PPUTUW4_RS03235 | Not Available | Negative | 738525 - 738986 | 16795.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.




