Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas sp. UW4 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere of common reeds |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Brassica napus, Medicago lupulina |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1236535 bp
Thymine Count
1233428 bp
Guanine Count
1854724 bp
Cytosine Count
1858701 bp
Genome Length
6183388 bp
Protein-coding Genes
5507 genes
Non-Coding Genes
98 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | PPUTUW4_RS03090 | Not Available | Negative | 706950 - 707897 | 35392.7 |
| coa-acylating methylmalonate-semialdehyde dehydrogenase | PPUTUW4_RS03095 | Q0WM29 | Positive | 708048 - 709574 | 54008.3 |
| 3-hydroxyisobutyrate dehydrogenase | PPUTUW4_RS03100 | Q54CX6 | Positive | 709585 - 710472 | 30107.7 |
| cupin domain-containing protein | PPUTUW4_RS03105 | Not Available | Negative | 710638 - 710982 | 13069.8 |
| merr family transcriptional regulator | PPUTUW4_RS03110 | Not Available | Negative | 711089 - 711460 | 14003.9 |
| nad(p)h-dependent oxidoreductase | PPUTUW4_RS03115 | P45245 | Negative | 711510 - 712088 | 21771.6 |
| lysr family transcriptional regulator | PPUTUW4_RS03120 | Q47141 | Negative | 712131 - 713015 | 31926.6 |
| sulfite exporter taue/safe family protein | PPUTUW4_RS03125 | Not Available | Positive | 713231 - 713995 | 26250.5 |
| putative quinol monooxygenase | PPUTUW4_RS03130 | Not Available | Negative | 713985 - 714299 | 12242.4 |
| nad(p)h-dependent oxidoreductase | PPUTUW4_RS03135 | P0AEY7 | Positive | 714463 - 715053 | 21986.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.




