Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas sp. UW4 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere of common reeds |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Brassica napus, Medicago lupulina |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1236535 bp
Thymine Count
1233428 bp
Guanine Count
1854724 bp
Cytosine Count
1858701 bp
Genome Length
6183388 bp
Protein-coding Genes
5507 genes
Non-Coding Genes
98 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sdr family oxidoreductase | PPUTUW4_RS02995 | Not Available | Negative | 678500 - 679189 | 24329.3 |
| hypothetical protein | PPUTUW4_RS30005 | Not Available | Negative | 679209 - 679367 | 5919.36 |
| hypothetical protein | PPUTUW4_RS03000 | Not Available | Positive | 679447 - 679938 | 17849.8 |
| abc transporter permease | PPUTUW4_RS03005 | D4GPW1 | Negative | 679935 - 680861 | 32567.2 |
| abc transporter permease | PPUTUW4_RS03010 | D4GPW2 | Negative | 680861 - 681967 | 39395.5 |
| abc transporter atp-binding protein | PPUTUW4_RS03015 | A2RKA7 | Negative | 681979 - 683544 | 55998.9 |
| yigz family protein | PPUTUW4_RS03020 | P32438 | Negative | 684126 - 684707 | 20696.7 |
| tetr/acrr family transcriptional regulator | PPUTUW4_RS03025 | P0ACU3 | Negative | 684726 - 685376 | 24430.2 |
| lysr family transcriptional regulator | PPUTUW4_RS03030 | Not Available | Negative | 685576 - 686496 | 34183.2 |
| aspartate aminotransferase family protein | PPUTUW4_RS03035 | P28269 | Positive | 686635 - 687984 | 48641.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.




