Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas sp. UW4 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere of common reeds |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Brassica napus, Medicago lupulina |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1236535 bp
Thymine Count
1233428 bp
Guanine Count
1854724 bp
Cytosine Count
1858701 bp
Genome Length
6183388 bp
Protein-coding Genes
5507 genes
Non-Coding Genes
98 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| multidrug effflux mfs transporter | PPUTUW4_RS02950 | B5XZP2 | Positive | 668291 - 669487 | 40971.1 |
| hypothetical protein | PPUTUW4_RS30000 | Not Available | Negative | 669496 - 669669 | 6559.0 |
| zinc-binding alcohol dehydrogenase family protein | PPUTUW4_RS02955 | Not Available | Negative | 669920 - 670933 | 36150.6 |
| lysr family transcriptional regulator | PPUTUW4_RS02960 | P45463 | Positive | 671055 - 671984 | 34276.4 |
| helix-turn-helix transcriptional regulator | PPUTUW4_RS02965 | Not Available | Positive | 672300 - 673034 | 26294.7 |
| adenosine deaminase | PPUTUW4_RS02970 | Q3KIJ1 | Negative | 673106 - 674059 | 36207.1 |
| isopenicillin n synthase family oxygenase | PPUTUW4_RS02975 | C8VK14 | Negative | 674142 - 675107 | 35844.5 |
| bmp family abc transporter substrate-binding protein | PPUTUW4_RS02980 | Q2YKI6 | Negative | 675252 - 676334 | 39331.8 |
| hypothetical protein | PPUTUW4_RS02985 | Not Available | Positive | 676436 - 676681 | 8878.73 |
| 8-oxoguanine deaminase | PPUTUW4_RS02990 | Q9I6Z0 | Negative | 676882 - 678240 | 48781.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.




