Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas sp. UW4 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere of common reeds |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Brassica napus, Medicago lupulina |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1236535 bp
Thymine Count
1233428 bp
Guanine Count
1854724 bp
Cytosine Count
1858701 bp
Genome Length
6183388 bp
Protein-coding Genes
5507 genes
Non-Coding Genes
98 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome c oxidase subunit i | PPUTUW4_RS00250 | P31833 | Positive | 52597 - 54189 | 58791.0 |
| cytochrome c oxidase assembly protein | PPUTUW4_RS00255 | Q5LNX9 | Positive | 54328 - 54879 | 20301.6 |
| cytochrome c oxidase subunit 3 | PPUTUW4_RS00260 | O47475 | Positive | 54905 - 55792 | 33381.0 |
| twin transmembrane helix small protein | PPUTUW4_RS00265 | Not Available | Negative | 55819 - 56022 | 7208.1 |
| surf1 family protein | PPUTUW4_RS00270 | Not Available | Positive | 56094 - 56834 | 27831.4 |
| hypothetical protein | PPUTUW4_RS00275 | Not Available | Positive | 56800 - 57393 | 21871.5 |
| heme a synthase | PPUTUW4_RS00280 | Not Available | Positive | 57404 - 58477 | 38636.2 |
| heme o synthase | PPUTUW4_RS00285 | Q3KK91 | Positive | 58465 - 59364 | 32722.2 |
| sco family protein | PPUTUW4_RS00290 | P47206 | Positive | 59361 - 59996 | 23089.2 |
| metq/nlpa family abc transporter substrate-binding protein | PPUTUW4_RS00295 | Q9CK95 | Negative | 60170 - 60943 | 27727.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.




