Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas sp. UW4 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere of common reeds |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Brassica napus, Medicago lupulina |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1236535 bp
Thymine Count
1233428 bp
Guanine Count
1854724 bp
Cytosine Count
1858701 bp
Genome Length
6183388 bp
Protein-coding Genes
5507 genes
Non-Coding Genes
98 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type vi secretion system vgr family protein | PPUTUW4_RS02850 | Q9HYC3 | Positive | 646476 - 647795 | 48499.4 |
| duf4123 domain-containing protein | PPUTUW4_RS02855 | Not Available | Positive | 647792 - 648592 | 30198.2 |
| mate family efflux transporter | PPUTUW4_RS02860 | P28303 | Negative | 648604 - 649953 | 48637.3 |
| hypothetical protein | PPUTUW4_RS02865 | Not Available | Negative | 650130 - 650423 | 10664.4 |
| mazg-like family protein | PPUTUW4_RS02870 | Not Available | Positive | 650683 - 650985 | 11452.7 |
| methyltransferase domain-containing protein | PPUTUW4_RS02875 | Q8XDG3 | Positive | 650985 - 651734 | 28269.2 |
| duf4136 domain-containing protein | PPUTUW4_RS02880 | Not Available | Positive | 651747 - 652349 | 21657.2 |
| duf4136 domain-containing protein | PPUTUW4_RS02885 | Not Available | Positive | 652387 - 652950 | 21340.1 |
| atp-binding protein | PPUTUW4_RS02890 | Q9HWA7 | Negative | 653087 - 655828 | 103026.0 |
| glutamine synthetase | PPUTUW4_RS02895 | Not Available | Negative | 655825 - 655959 | 4529.61 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.




