Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas sp. UW4 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere of common reeds |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Brassica napus, Medicago lupulina |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1236535 bp
Thymine Count
1233428 bp
Guanine Count
1854724 bp
Cytosine Count
1858701 bp
Genome Length
6183388 bp
Protein-coding Genes
5507 genes
Non-Coding Genes
98 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetyl-coa carboxylase biotin carboxylase subunit | PPUTUW4_RS02800 | P37798 | Negative | 633267 - 634625 | 48929.9 |
| acetyl-coa carboxylase biotin carboxyl carrier protein | PPUTUW4_RS02805 | P37799 | Negative | 634643 - 635122 | 16662.0 |
| type ii 3-dehydroquinate dehydratase | PPUTUW4_RS02810 | O30557 | Negative | 635147 - 635602 | 16645.9 |
| protein-disulfide reductase dsbd | PPUTUW4_RS02815 | Q9HUW5 | Negative | 635735 - 637483 | 62798.0 |
| methyl-accepting chemotaxis protein | PPUTUW4_RS02820 | Q9HUW6 | Negative | 637655 - 639601 | 69031.3 |
| diguanylate cyclase gcba | PPUTUW4_RS02825 | Not Available | Negative | 639708 - 641324 | 61020.2 |
| duf2333 family protein | PPUTUW4_RS02830 | Not Available | Positive | 641808 - 642875 | 39283.7 |
| nudix hydrolase | PPUTUW4_RS02835 | Q9HUW9 | Positive | 642879 - 643412 | 19727.3 |
| translation initiation factor sui1 | PPUTUW4_RS02840 | P45116 | Positive | 643740 - 644111 | 12676.6 |
| arginine decarboxylase | PPUTUW4_RS02845 | Q88QC7 | Positive | 644331 - 646244 | 71144.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.




