Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas sp. UW4 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere of common reeds |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Brassica napus, Medicago lupulina |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1236535 bp
Thymine Count
1233428 bp
Guanine Count
1854724 bp
Cytosine Count
1858701 bp
Genome Length
6183388 bp
Protein-coding Genes
5507 genes
Non-Coding Genes
98 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PPUTUW4_RS02750 | Not Available | Positive | 621038 - 621853 | 29710.7 |
| hypothetical protein | PPUTUW4_RS02755 | Not Available | Positive | 621908 - 622669 | 27465.8 |
| marc family protein | PPUTUW4_RS02760 | O66819 | Negative | 622638 - 623234 | 21418.0 |
| hybrid sensor histidine kinase/response regulator | PPUTUW4_RS02765 | Not Available | Negative | 623300 - 626077 | 102165.0 |
| phosphoribosylamine--glycine ligase | PPUTUW4_RS02770 | Q87VR8 | Negative | 626178 - 627473 | 45426.4 |
| bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/imp cyclohydrolase | PPUTUW4_RS02775 | C3K6E0 | Negative | 627629 - 629236 | 57295.5 |
| dna-binding transcriptional regulator fis | PPUTUW4_RS02780 | Q9HUW0 | Negative | 629319 - 629639 | 11740.2 |
| trna dihydrouridine synthase dusb | PPUTUW4_RS02785 | Q87VS1 | Negative | 629636 - 630646 | 36518.2 |
| duf3426 domain-containing protein | PPUTUW4_RS02790 | Not Available | Negative | 630831 - 632084 | 46663.7 |
| 50s ribosomal protein l11 methyltransferase | PPUTUW4_RS02795 | Q3KIP5 | Negative | 632115 - 632993 | 31720.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.




