Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas sp. UW4 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere of common reeds |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Brassica napus, Medicago lupulina |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1236535 bp
Thymine Count
1233428 bp
Guanine Count
1854724 bp
Cytosine Count
1858701 bp
Genome Length
6183388 bp
Protein-coding Genes
5507 genes
Non-Coding Genes
98 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protease modulator hflc | PPUTUW4_RS27415 | Not Available | Negative | 6144256 - 6145299 | 37914.7 |
| protease modulator hflk | PPUTUW4_RS27420 | Not Available | Negative | 6145296 - 6147254 | 69931.6 |
| dihydrolipoyl dehydrogenase | PPUTUW4_RS27425 | P31046 | Positive | 6147469 - 6148869 | 49048.1 |
| lrp/asnc family transcriptional regulator | PPUTUW4_RS27430 | P56901 | Negative | 6148982 - 6149455 | 17290.0 |
| lyse family translocator | PPUTUW4_RS27435 | Q9L6N6 | Positive | 6149602 - 6150231 | 22235.9 |
| hypothetical protein | PPUTUW4_RS27440 | Not Available | Negative | 6150235 - 6152352 | 77987.7 |
| duf3142 domain-containing protein | PPUTUW4_RS27445 | Not Available | Negative | 6152339 - 6153535 | 43737.2 |
| pyridoxamine 5'-phosphate oxidase family protein | PPUTUW4_RS27450 | P49852 | Negative | 6153773 - 6155803 | 74736.0 |
| glutathione s-transferase family protein | PPUTUW4_RS27455 | Q52828 | Negative | 6155867 - 6156493 | 22484.2 |
| lysr family transcriptional regulator | PPUTUW4_RS27460 | Not Available | Negative | 6156620 - 6157522 | 32705.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.




