Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas sp. UW4 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere of common reeds |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Brassica napus, Medicago lupulina |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1236535 bp
Thymine Count
1233428 bp
Guanine Count
1854724 bp
Cytosine Count
1858701 bp
Genome Length
6183388 bp
Protein-coding Genes
5507 genes
Non-Coding Genes
98 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 5-(carboxyamino)imidazole ribonucleotide synthase | PPUTUW4_RS27225 | P72158 | Negative | 6099625 - 6100707 | 38817.5 |
| 5-(carboxyamino)imidazole ribonucleotide mutase | PPUTUW4_RS27230 | P72157 | Negative | 6100719 - 6101210 | 16856.6 |
| lysr substrate-binding domain-containing protein | PPUTUW4_RS27235 | P39376 | Negative | 6101543 - 6102460 | 33329.6 |
| aspartate ammonia-lyase | PPUTUW4_RS27240 | P07346 | Positive | 6102641 - 6104065 | 51030.1 |
| sodium:alanine symporter family protein | PPUTUW4_RS27245 | O31464 | Positive | 6104596 - 6106044 | 51881.0 |
| asparaginase | PPUTUW4_RS27250 | P0A963 | Positive | 6106184 - 6107188 | 35277.4 |
| arac family transcriptional regulator | PPUTUW4_RS27255 | Q9I1P2 | Positive | 6107349 - 6108347 | 36874.1 |
| histone deacetylase family protein | PPUTUW4_RS27260 | Q9I3T5 | Positive | 6108606 - 6109637 | 37638.1 |
| polyamine abc transporter substrate-binding protein | PPUTUW4_RS27265 | Not Available | Positive | 6109649 - 6110749 | 40653.9 |
| plp-dependent aminotransferase family protein | PPUTUW4_RS27270 | Not Available | Negative | 6110813 - 6112366 | 56198.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.




