Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas sp. UW4 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere of common reeds |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Brassica napus, Medicago lupulina |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1236535 bp
Thymine Count
1233428 bp
Guanine Count
1854724 bp
Cytosine Count
1858701 bp
Genome Length
6183388 bp
Protein-coding Genes
5507 genes
Non-Coding Genes
98 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rubredoxin | PPUTUW4_RS27125 | Q9HTK7 | Negative | 6078861 - 6079031 | 6319.5 |
| chorismate lyase | PPUTUW4_RS27130 | Q3K4G4 | Positive | 6079232 - 6079795 | 21005.7 |
| 4-hydroxybenzoate octaprenyltransferase | PPUTUW4_RS27135 | Q3K4G3 | Positive | 6079795 - 6080685 | 33013.8 |
| hypothetical protein | PPUTUW4_RS27140 | Not Available | Negative | 6080739 - 6081122 | 14212.3 |
| phosphate regulon transcriptional regulator phob | PPUTUW4_RS27145 | P23620 | Positive | 6081276 - 6081965 | 25655.0 |
| phosphate regulon sensor histidine kinase phor | PPUTUW4_RS27150 | P23621 | Positive | 6082046 - 6083332 | 48327.8 |
| hemolysin family protein | PPUTUW4_RS27155 | P54505 | Positive | 6083456 - 6084796 | 49917.0 |
| peptidoglycan dd-metalloendopeptidase family protein | PPUTUW4_RS27160 | Not Available | Negative | 6084924 - 6085817 | 32081.9 |
| is110 family transposase | PPUTUW4_RS27165 | Not Available | Negative | 6086009 - 6086950 | 35025.6 |
| response regulator | PPUTUW4_RS27170 | Not Available | Negative | 6087201 - 6088103 | 32427.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.




