Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas sp. UW4 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere of common reeds |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Brassica napus, Medicago lupulina |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1236535 bp
Thymine Count
1233428 bp
Guanine Count
1854724 bp
Cytosine Count
1858701 bp
Genome Length
6183388 bp
Protein-coding Genes
5507 genes
Non-Coding Genes
98 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutamine synthetase | PPUTUW4_RS27025 | Q56897 | Positive | 6058775 - 6059764 | 36138.1 |
| duf4870 domain-containing protein | PPUTUW4_RS27030 | Not Available | Negative | 6060194 - 6060562 | 13682.2 |
| ribonuclease ph | PPUTUW4_RS27035 | Q3K4M0 | Negative | 6060591 - 6061313 | 25774.2 |
| yicc/yloc family endoribonuclease | PPUTUW4_RS27040 | P23839 | Positive | 6061582 - 6062445 | 32030.6 |
| guanylate kinase | PPUTUW4_RS27045 | Q4K3R4 | Positive | 6062458 - 6063078 | 23305.7 |
| dna-directed rna polymerase subunit omega | PPUTUW4_RS27050 | Q4K3R3 | Positive | 6063246 - 6063509 | 9676.37 |
| bifunctional gtp diphosphokinase/guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase | PPUTUW4_RS27055 | P0AG25 | Positive | 6063567 - 6065672 | 78532.6 |
| rida family protein | PPUTUW4_RS27060 | P40431 | Positive | 6065709 - 6066089 | 13511.4 |
| hypothetical protein | PPUTUW4_RS27065 | Not Available | Positive | 6066157 - 6066897 | 26440.9 |
| sdr family oxidoreductase | PPUTUW4_RS27070 | Not Available | Negative | 6067026 - 6067883 | 30840.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.




