Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas sp. UW4 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere of common reeds |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Brassica napus, Medicago lupulina |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1236535 bp
Thymine Count
1233428 bp
Guanine Count
1854724 bp
Cytosine Count
1858701 bp
Genome Length
6183388 bp
Protein-coding Genes
5507 genes
Non-Coding Genes
98 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l33 | PPUTUW4_RS26975 | Q88BC7 | Negative | 6049366 - 6049521 | 6004.39 |
| 50s ribosomal protein l28 | PPUTUW4_RS26980 | Q3K4N0 | Negative | 6049533 - 6049766 | 8966.05 |
| abc transporter substrate-binding protein | PPUTUW4_RS26985 | A0A0H2ZI72 | Positive | 6050213 - 6051799 | 58165.3 |
| radc family protein | PPUTUW4_RS26990 | Q3K4M8 | Negative | 6051926 - 6052600 | 25095.1 |
| bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase coabc | PPUTUW4_RS26995 | Q9KVD1 | Positive | 6052736 - 6053944 | 42934.0 |
| dutp diphosphatase | PPUTUW4_RS27000 | Q3K4M6 | Positive | 6053950 - 6054405 | 16275.8 |
| glutamine synthetase | PPUTUW4_RS27005 | Q88C93 | Positive | 6054639 - 6056042 | 50853.9 |
| acetylglutamate kinase | PPUTUW4_RS27010 | Q4K3S0 | Positive | 6056060 - 6056965 | 31817.2 |
| orotate phosphoribosyltransferase | PPUTUW4_RS27015 | Q3K4M3 | Negative | 6057145 - 6057789 | 23051.6 |
| exodeoxyribonuclease iii | PPUTUW4_RS27020 | P37454 | Positive | 6057870 - 6058649 | 29826.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.




