Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas sp. UW4 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere of common reeds |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Brassica napus, Medicago lupulina |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1236535 bp
Thymine Count
1233428 bp
Guanine Count
1854724 bp
Cytosine Count
1858701 bp
Genome Length
6183388 bp
Protein-coding Genes
5507 genes
Non-Coding Genes
98 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| d-amino acid dehydrogenase | PPUTUW4_RS26925 | Q48PZ1 | Negative | 6038157 - 6039461 | 47106.7 |
| lrp/asnc ligand binding domain-containing protein | PPUTUW4_RS26930 | P0ACJ2 | Positive | 6039619 - 6040107 | 18673.8 |
| ykgj family cysteine cluster protein | PPUTUW4_RS26935 | Not Available | Negative | 6040243 - 6040596 | 13107.9 |
| fad-binding oxidoreductase | PPUTUW4_RS26940 | Not Available | Positive | 6040744 - 6042051 | 47276.1 |
| duf1127 domain-containing protein | PPUTUW4_RS26945 | Not Available | Negative | 6042195 - 6042440 | 9210.97 |
| plp-dependent aminotransferase family protein | PPUTUW4_RS26950 | Not Available | Positive | 6042620 - 6044053 | 53157.4 |
| phospholipase d family protein | PPUTUW4_RS26955 | Not Available | Positive | 6044114 - 6045688 | 58343.6 |
| mfs transporter | PPUTUW4_RS26960 | Not Available | Negative | 6045752 - 6046894 | 40007.3 |
| aldehyde dehydrogenase | PPUTUW4_RS26965 | Not Available | Negative | 6047087 - 6048580 | 53023.4 |
| cupin domain-containing protein | PPUTUW4_RS26970 | Not Available | Positive | 6048816 - 6049178 | 13440.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.




