Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas sp. UW4 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere of common reeds |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Brassica napus, Medicago lupulina |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1236535 bp
Thymine Count
1233428 bp
Guanine Count
1854724 bp
Cytosine Count
1858701 bp
Genome Length
6183388 bp
Protein-coding Genes
5507 genes
Non-Coding Genes
98 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr substrate-binding domain-containing protein | PPUTUW4_RS26875 | Not Available | Negative | 6025880 - 6026800 | 34768.6 |
| norm family multidrug efflux mate transporter | PPUTUW4_RS26880 | Q88BA2 | Positive | 6026959 - 6028356 | 50022.7 |
| bifunctional diguanylate cyclase/phosphodiesterase | PPUTUW4_RS26885 | Q9HYT3 | Negative | 6028492 - 6030165 | 62233.0 |
| dna helicase rep | PPUTUW4_RS26890 | Q9L6S1 | Positive | 6030430 - 6032439 | 76631.8 |
| xanthine phosphoribosyltransferase | PPUTUW4_RS26895 | Q3K4P7 | Positive | 6032495 - 6033067 | 20406.8 |
| acetyl-coa hydrolase/transferase c-terminal domain-containing protein | PPUTUW4_RS26900 | P38942 | Negative | 6033197 - 6035119 | 70796.9 |
| cytochrome c5 family protein | PPUTUW4_RS26905 | P00121 | Negative | 6035379 - 6035801 | 13883.9 |
| cupin domain-containing protein | PPUTUW4_RS26910 | Not Available | Negative | 6035984 - 6036532 | 20000.0 |
| alanine racemase | PPUTUW4_RS26915 | Q4K3T9 | Negative | 6036661 - 6037734 | 38591.0 |
| rida family protein | PPUTUW4_RS26920 | P0AEB8 | Negative | 6037832 - 6038185 | 12884.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.




