Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas sp. UW4 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere of common reeds |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Brassica napus, Medicago lupulina |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1236535 bp
Thymine Count
1233428 bp
Guanine Count
1854724 bp
Cytosine Count
1858701 bp
Genome Length
6183388 bp
Protein-coding Genes
5507 genes
Non-Coding Genes
98 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| class i adenylate cyclase | PPUTUW4_RS26780 | Q59685 | Positive | 6009847 - 6012690 | 108605.0 |
| nucleoside diphosphate kinase regulator | PPUTUW4_RS26785 | P0AFW6 | Negative | 6012698 - 6013108 | 14549.3 |
| duf1289 domain-containing protein | PPUTUW4_RS26790 | Not Available | Negative | 6013336 - 6013557 | 8155.74 |
| iron donor protein cyay | PPUTUW4_RS26795 | Q3K4S1 | Negative | 6013562 - 6013894 | 12577.5 |
| lps translocon maturation chaperone lptm | PPUTUW4_RS28550 | Not Available | Positive | 6014225 - 6014401 | 6264.48 |
| diaminopimelate decarboxylase | PPUTUW4_RS26805 | O05321 | Positive | 6014414 - 6015661 | 45083.7 |
| diaminopimelate epimerase | PPUTUW4_RS26810 | Q3K4R8 | Positive | 6015666 - 6016496 | 30167.3 |
| duf484 family protein | PPUTUW4_RS26815 | Not Available | Positive | 6016510 - 6017235 | 27008.4 |
| tyrosine recombinase xerc | PPUTUW4_RS26820 | Q8VS06 | Positive | 6017238 - 6018137 | 33605.2 |
| had family hydrolase | PPUTUW4_RS26825 | Q72H00 | Positive | 6018134 - 6018841 | 25989.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.




