Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas sp. UW4 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere of common reeds |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Brassica napus, Medicago lupulina |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1236535 bp
Thymine Count
1233428 bp
Guanine Count
1854724 bp
Cytosine Count
1858701 bp
Genome Length
6183388 bp
Protein-coding Genes
5507 genes
Non-Coding Genes
98 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutamine synthetase | PPUTUW4_RS26685 | Q3K4U8 | Negative | 5991148 - 5991602 | 16624.3 |
| ftr1 family protein | PPUTUW4_RS26690 | P39595 | Negative | 5991711 - 5993609 | 67158.2 |
| homoserine/homoserine lactone efflux protein | PPUTUW4_RS26695 | P0AG36 | Negative | 5993767 - 5994399 | 22785.6 |
| mechanosensitive ion channel family protein | PPUTUW4_RS26700 | Not Available | Negative | 5994626 - 5995207 | 21304.6 |
| atp-binding cassette domain-containing protein | PPUTUW4_RS26705 | Not Available | Negative | 5995207 - 5997117 | 71083.5 |
| tigr02444 family protein | PPUTUW4_RS26710 | Not Available | Positive | 5997168 - 5997632 | 17103.3 |
| algp family protein | PPUTUW4_RS28545 | P15276 | Negative | 5997629 - 5998729 | 35467.3 |
| fkbp-type peptidyl-prolyl cis-trans isomerase | PPUTUW4_RS26720 | P30417 | Positive | 5998922 - 5999587 | 23936.5 |
| rsd/algq family anti-sigma factor | PPUTUW4_RS26725 | P15275 | Negative | 5999648 - 6000106 | 17187.4 |
| disulfide bond formation protein b | PPUTUW4_RS26730 | Q3K4T4 | Negative | 6000284 - 6000835 | 19947.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.




