Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas sp. UW4 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere of common reeds |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Brassica napus, Medicago lupulina |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1236535 bp
Thymine Count
1233428 bp
Guanine Count
1854724 bp
Cytosine Count
1858701 bp
Genome Length
6183388 bp
Protein-coding Genes
5507 genes
Non-Coding Genes
98 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| spfh domain-containing protein | PPUTUW4_RS26500 | P0AA55 | Positive | 5952789 - 5953709 | 33187.5 |
| nfed family protein | PPUTUW4_RS26505 | P0AAS3 | Positive | 5953718 - 5954167 | 16575.4 |
| duf2388 domain-containing protein | PPUTUW4_RS26510 | Not Available | Positive | 5954236 - 5954553 | 10945.0 |
| aminomethyl-transferring glycine dehydrogenase | PPUTUW4_RS26515 | Q3K4Z1 | Negative | 5954748 - 5957621 | 104136.0 |
| hypothetical protein | PPUTUW4_RS29955 | Not Available | Positive | 5957799 - 5957939 | 5256.59 |
| glycine cleavage system protein gcvh | PPUTUW4_RS26520 | Q88CI8 | Negative | 5958037 - 5958420 | 13406.5 |
| glycine cleavage system aminomethyltransferase gcvt | PPUTUW4_RS26525 | Q88AS0 | Negative | 5958470 - 5959552 | 39783.8 |
| iron abc transporter permease | PPUTUW4_RS26530 | Not Available | Negative | 5959709 - 5961325 | 58961.9 |
| extracellular solute-binding protein | PPUTUW4_RS26535 | Q9HTX3 | Negative | 5961530 - 5962534 | 36567.9 |
| 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase | PPUTUW4_RS26540 | P25535 | Negative | 5962781 - 5963998 | 44293.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.




