Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas sp. UW4 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere of common reeds |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Brassica napus, Medicago lupulina |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1236535 bp
Thymine Count
1233428 bp
Guanine Count
1854724 bp
Cytosine Count
1858701 bp
Genome Length
6183388 bp
Protein-coding Genes
5507 genes
Non-Coding Genes
98 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| had family phosphatase | PPUTUW4_RS26260 | Not Available | Positive | 5898701 - 5899357 | 24771.3 |
| glutamine synthetase | PPUTUW4_RS30450 | Not Available | Negative | 5899366 - 5899455 | 3242.9 |
| duf2269 domain-containing protein | PPUTUW4_RS26265 | Not Available | Negative | 5899464 - 5899889 | 15351.6 |
| threonine ammonia-lyase, biosynthetic | PPUTUW4_RS26270 | Not Available | Negative | 5899929 - 5901443 | 55094.9 |
| ribose-5-phosphate isomerase rpia | PPUTUW4_RS26275 | C3K3R7 | Positive | 5901761 - 5902435 | 23563.4 |
| sdia-regulated domain-containing protein | PPUTUW4_RS26280 | Q8XB94 | Negative | 5902581 - 5903498 | 34251.2 |
| sdia-regulated domain-containing protein | PPUTUW4_RS26285 | Not Available | Negative | 5903595 - 5904521 | 34501.6 |
| fumarylacetoacetate hydrolase family protein | PPUTUW4_RS26290 | P76004 | Negative | 5904778 - 5905443 | 23594.4 |
| fad-binding oxidoreductase | PPUTUW4_RS26295 | A4VGK4 | Negative | 5905484 - 5906878 | 51036.9 |
| phosphoglycerate dehydrogenase | PPUTUW4_RS26300 | P0A9T2 | Positive | 5907083 - 5908312 | 44260.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.




