Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas sp. UW4 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere of common reeds |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Brassica napus, Medicago lupulina |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1236535 bp
Thymine Count
1233428 bp
Guanine Count
1854724 bp
Cytosine Count
1858701 bp
Genome Length
6183388 bp
Protein-coding Genes
5507 genes
Non-Coding Genes
98 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf6124 family protein | PPUTUW4_RS26160 | Not Available | Negative | 5875908 - 5876195 | 9999.93 |
| haloacid dehalogenase-like hydrolase | PPUTUW4_RS26165 | Q9HTR2 | Negative | 5876660 - 5877715 | 39252.4 |
| l-cystine transporter | PPUTUW4_RS26170 | P77529 | Positive | 5877958 - 5879349 | 48278.5 |
| dihydrofolate reductase | PPUTUW4_RS26175 | P12833 | Negative | 5879466 - 5879978 | 19189.0 |
| duf2868 domain-containing protein | PPUTUW4_RS26180 | Not Available | Positive | 5880077 - 5881447 | 49863.2 |
| gtpase/duf3482 domain-containing protein | PPUTUW4_RS26185 | Not Available | Positive | 5881440 - 5882816 | 50230.2 |
| hypothetical protein | PPUTUW4_RS26190 | Not Available | Negative | 5882829 - 5883359 | 20197.1 |
| phosphonate degradation hd-domain oxygenase | PPUTUW4_RS26195 | D0E8I5 | Negative | 5883451 - 5884017 | 21341.2 |
| putative 2-aminoethylphosphonate abc transporter substrate-binding protein | PPUTUW4_RS26200 | P43951 | Negative | 5884153 - 5885178 | 37348.6 |
| putative 2-aminoethylphosphonate abc transporter permease subunit | PPUTUW4_RS26205 | Not Available | Negative | 5885212 - 5886936 | 61656.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.




