Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas sp. UW4 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere of common reeds |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Brassica napus, Medicago lupulina |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1236535 bp
Thymine Count
1233428 bp
Guanine Count
1854724 bp
Cytosine Count
1858701 bp
Genome Length
6183388 bp
Protein-coding Genes
5507 genes
Non-Coding Genes
98 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| urease subunit alpha | PPUTUW4_RS02600 | Q3KIT2 | Negative | 592139 - 593839 | 60645.6 |
| urease subunit beta | PPUTUW4_RS02605 | Q3KIT1 | Negative | 593979 - 594284 | 11140.3 |
| gnat family n-acetyltransferase | PPUTUW4_RS02610 | P16966 | Negative | 594284 - 594817 | 19505.3 |
| gnat family n-acetyltransferase | PPUTUW4_RS02615 | A6VCX3 | Negative | 594824 - 595357 | 19603.3 |
| urease subunit gamma | PPUTUW4_RS02620 | Q87VP4 | Negative | 595367 - 595669 | 11018.5 |
| urease accessory protein ured | PPUTUW4_RS02625 | Q3KIS7 | Negative | 595740 - 596579 | 30593.7 |
| urea abc transporter atp-binding subunit urte | PPUTUW4_RS02630 | Not Available | Negative | 596745 - 597443 | 25510.3 |
| urea abc transporter atp-binding protein urtd | PPUTUW4_RS02635 | O28881 | Negative | 597576 - 598445 | 31520.0 |
| urea abc transporter permease subunit urtc | PPUTUW4_RS02640 | Not Available | Negative | 598442 - 599521 | 38799.6 |
| urea abc transporter permease subunit urtb | PPUTUW4_RS02645 | Not Available | Negative | 599521 - 601023 | 53115.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.




