Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas sp. UW4 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere of common reeds |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Brassica napus, Medicago lupulina |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1236535 bp
Thymine Count
1233428 bp
Guanine Count
1854724 bp
Cytosine Count
1858701 bp
Genome Length
6183388 bp
Protein-coding Genes
5507 genes
Non-Coding Genes
98 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| c40 family peptidase | PPUTUW4_RS25960 | Not Available | Positive | 5838158 - 5838778 | 23018.7 |
| type iv pilus twitching motility protein pilt | PPUTUW4_RS25965 | P24559 | Negative | 5838907 - 5839941 | 37659.5 |
| yggs family pyridoxal phosphate-dependent enzyme | PPUTUW4_RS25970 | P24562 | Positive | 5839998 - 5840684 | 24581.3 |
| pyrroline-5-carboxylate reductase | PPUTUW4_RS25975 | P22008 | Positive | 5840720 - 5841538 | 28137.9 |
| yggt family protein | PPUTUW4_RS25980 | P25254 | Positive | 5841549 - 5842139 | 21562.8 |
| duf167 domain-containing protein | PPUTUW4_RS25985 | Q3K595 | Positive | 5842144 - 5842437 | 10816.2 |
| homoserine o-acetyltransferase | PPUTUW4_RS25990 | Q3K594 | Positive | 5842622 - 5843761 | 41583.3 |
| methionine biosynthesis protein metw | PPUTUW4_RS25995 | Q7UG04 | Positive | 5843769 - 5844389 | 23440.0 |
| duf4426 domain-containing protein | PPUTUW4_RS26000 | Not Available | Positive | 5844416 - 5844850 | 15920.2 |
| rdgb/ham1 family non-canonical purine ntp pyrophosphatase | PPUTUW4_RS26005 | Q88CT0 | Positive | 5844847 - 5845443 | 21330.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.




