Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas sp. UW4 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere of common reeds |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Brassica napus, Medicago lupulina |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1236535 bp
Thymine Count
1233428 bp
Guanine Count
1854724 bp
Cytosine Count
1858701 bp
Genome Length
6183388 bp
Protein-coding Genes
5507 genes
Non-Coding Genes
98 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| malonate decarboxylase holo-acp synthase | PPUTUW4_RS25860 | Q3K5C0 | Negative | 5815654 - 5816274 | 22342.9 |
| biotin-independent malonate decarboxylase subunit gamma | PPUTUW4_RS25865 | O06927 | Negative | 5816268 - 5817071 | 28037.7 |
| biotin-independent malonate decarboxylase subunit beta | PPUTUW4_RS25870 | O06926 | Negative | 5817068 - 5817919 | 30167.1 |
| malonate decarboxylase subunit delta | PPUTUW4_RS25875 | Q3K5B7 | Negative | 5817912 - 5818211 | 10762.8 |
| triphosphoribosyl-dephospho-coa synthase | PPUTUW4_RS25880 | Q3K5B6 | Negative | 5818211 - 5819101 | 31242.5 |
| malonate decarboxylase subunit alpha | PPUTUW4_RS25885 | O06924 | Negative | 5819101 - 5820771 | 61157.7 |
| chemotaxis protein chew | PPUTUW4_RS25890 | Not Available | Negative | 5820994 - 5821455 | 16749.6 |
| hpt domain-containing protein | PPUTUW4_RS25895 | Not Available | Negative | 5821448 - 5827468 | 221710.0 |
| methyl-accepting chemotaxis protein | PPUTUW4_RS25900 | P42257 | Negative | 5827506 - 5829539 | 72598.9 |
| chemotaxis protein chew | PPUTUW4_RS25905 | P43502 | Negative | 5829719 - 5830258 | 20095.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.




