Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas sp. UW4 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere of common reeds |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Brassica napus, Medicago lupulina |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1236535 bp
Thymine Count
1233428 bp
Guanine Count
1854724 bp
Cytosine Count
1858701 bp
Genome Length
6183388 bp
Protein-coding Genes
5507 genes
Non-Coding Genes
98 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad(p)/fad-dependent oxidoreductase | PPUTUW4_RS25660 | P37631 | Positive | 5771705 - 5772883 | 42730.2 |
| yccs family putative transporter | PPUTUW4_RS25665 | P75870 | Positive | 5773105 - 5775288 | 80530.9 |
| abc transporter substrate-binding protein | PPUTUW4_RS25670 | Not Available | Negative | 5775427 - 5776164 | 27526.2 |
| gnat family n-acetyltransferase | PPUTUW4_RS25675 | P0AEH3 | Positive | 5776423 - 5776875 | 16869.3 |
| helix-turn-helix domain-containing protein | PPUTUW4_RS25680 | Not Available | Negative | 5776973 - 5777269 | 11178.3 |
| ygjp-like metallopeptidase domain-containing protein | PPUTUW4_RS25685 | P42597 | Negative | 5777280 - 5777795 | 19875.2 |
| bifunctional diguanylate cyclase/phosphodiesterase | PPUTUW4_RS25690 | Not Available | Negative | 5777841 - 5779964 | 79479.8 |
| polysaccharide lyase family 7 protein | PPUTUW4_RS25695 | Not Available | Positive | 5780287 - 5780955 | 24774.1 |
| class ii fructose-bisphosphate aldolase | PPUTUW4_RS25700 | Q9I5Y1 | Negative | 5781149 - 5782213 | 38359.9 |
| mlic family protein | PPUTUW4_RS25705 | Not Available | Negative | 5782478 - 5782819 | 12434.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.




