Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas sp. UW4 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere of common reeds |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Brassica napus, Medicago lupulina |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1236535 bp
Thymine Count
1233428 bp
Guanine Count
1854724 bp
Cytosine Count
1858701 bp
Genome Length
6183388 bp
Protein-coding Genes
5507 genes
Non-Coding Genes
98 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| triacylglycerol lipase | PPUTUW4_RS02550 | Not Available | Positive | 577847 - 578737 | 32326.8 |
| dmt family transporter | PPUTUW4_RS02555 | O29740 | Negative | 578841 - 579728 | 31637.6 |
| helix-turn-helix transcriptional regulator | PPUTUW4_RS02560 | Not Available | Positive | 579826 - 580620 | 29961.6 |
| psif family protein | PPUTUW4_RS02565 | Not Available | Positive | 580685 - 580993 | 10948.6 |
| ai-2e family transporter | PPUTUW4_RS02570 | Not Available | Positive | 581268 - 582281 | 36813.0 |
| hsp70 family protein | PPUTUW4_RS02575 | P36928 | Negative | 582405 - 583679 | 46631.7 |
| dnaj c-terminal domain-containing protein | PPUTUW4_RS02580 | Q88DH7 | Positive | 583977 - 584924 | 34325.5 |
| chaperone modulator cbpm | PPUTUW4_RS02585 | B1J5W6 | Positive | 584952 - 585257 | 11638.1 |
| sensor histidine kinase kdpd | PPUTUW4_RS02590 | Q9HWR3 | Negative | 585425 - 586552 | 40911.0 |
| dermonecrotic toxin domain-containing protein | PPUTUW4_RS02595 | Not Available | Positive | 586802 - 592072 | 197394.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.




