Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas sp. UW4 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere of common reeds |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Brassica napus, Medicago lupulina |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1236535 bp
Thymine Count
1233428 bp
Guanine Count
1854724 bp
Cytosine Count
1858701 bp
Genome Length
6183388 bp
Protein-coding Genes
5507 genes
Non-Coding Genes
98 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gamma carbonic anhydrase family protein | PPUTUW4_RS00200 | P0A9W9 | Negative | 42196 - 42741 | 19446.6 |
| oligopeptidase a | PPUTUW4_RS00205 | P27237 | Positive | 42830 - 44881 | 75566.0 |
| yhev family putative zinc ribbon protein | PPUTUW4_RS00210 | Not Available | Positive | 44878 - 45165 | 10512.6 |
| dual specificity protein phosphatase family protein | PPUTUW4_RS00215 | Not Available | Negative | 45209 - 45853 | 23718.6 |
| hypothetical protein | PPUTUW4_RS00220 | Not Available | Negative | 46095 - 46400 | 10880.8 |
| pa0069 family radical sam protein | PPUTUW4_RS00225 | P9WL78 | Positive | 46610 - 47668 | 39733.9 |
| carbonic anhydrase | PPUTUW4_RS00230 | Q9I262 | Positive | 47913 - 48644 | 26606.9 |
| sulp family inorganic anion transporter | PPUTUW4_RS00235 | O06984 | Positive | 48735 - 50261 | 53373.2 |
| hypothetical protein | PPUTUW4_RS00240 | Not Available | Negative | 50367 - 51017 | 24075.5 |
| cytochrome c oxidase subunit ii | PPUTUW4_RS00245 | Q1RI44 | Positive | 51387 - 52514 | 42239.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.




