Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas sp. UW4 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere of common reeds |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Brassica napus, Medicago lupulina |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1236535 bp
Thymine Count
1233428 bp
Guanine Count
1854724 bp
Cytosine Count
1858701 bp
Genome Length
6183388 bp
Protein-coding Genes
5507 genes
Non-Coding Genes
98 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| is110 family transposase | PPUTUW4_RS02405 | Not Available | Positive | 548720 - 549661 | 35025.6 |
| hypothetical protein | PPUTUW4_RS02410 | Not Available | Negative | 549806 - 549985 | 6529.5 |
| tigr00730 family rossman fold protein | PPUTUW4_RS02415 | P48636 | Negative | 550054 - 550641 | 20713.0 |
| azurin | PPUTUW4_RS02420 | Q9F646 | Positive | 550986 - 551432 | 15969.4 |
| ammonia-dependent nad(+) synthetase | PPUTUW4_RS02425 | Q3KIW5 | Negative | 551607 - 552434 | 29720.4 |
| nicotinate phosphoribosyltransferase | PPUTUW4_RS02430 | Q3KIW4 | Negative | 552439 - 553665 | 46779.4 |
| lysr family transcriptional regulator | PPUTUW4_RS02435 | Not Available | Negative | 553858 - 554769 | 34671.5 |
| aldehyde dehydrogenase family protein | PPUTUW4_RS02440 | P46562 | Positive | 554944 - 556434 | 53607.0 |
| fad-binding oxidoreductase | PPUTUW4_RS02445 | P44732 | Positive | 556591 - 557874 | 46578.8 |
| abc transporter substrate-binding protein | PPUTUW4_RS02450 | Q9HUQ0 | Positive | 558239 - 559372 | 39920.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.




