Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas sp. UW4 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere of common reeds |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Brassica napus, Medicago lupulina |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1236535 bp
Thymine Count
1233428 bp
Guanine Count
1854724 bp
Cytosine Count
1858701 bp
Genome Length
6183388 bp
Protein-coding Genes
5507 genes
Non-Coding Genes
98 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 23s rrna (guanosine(2251)-2'-o)-methyltransferase rlmb | PPUTUW4_RS02355 | Q87VK2 | Positive | 534134 - 534901 | 27492.3 |
| 30s ribosomal protein s6 | PPUTUW4_RS02360 | A4XPZ7 | Positive | 535208 - 535630 | 16314.8 |
| 30s ribosomal protein s18 | PPUTUW4_RS02365 | Q48NZ2 | Positive | 535659 - 535889 | 8917.85 |
| hypothetical protein | PPUTUW4_RS02370 | Not Available | Positive | 535926 - 536819 | 31954.8 |
| 50s ribosomal protein l9 | PPUTUW4_RS02375 | C3KE70 | Positive | 536839 - 537285 | 15568.5 |
| replicative dna helicase | PPUTUW4_RS02380 | P0ACB0 | Positive | 537419 - 538816 | 51568.3 |
| ygiq family radical sam protein | PPUTUW4_RS02385 | Q87VK8 | Positive | 539005 - 541308 | 86034.2 |
| duf2126 domain-containing protein | PPUTUW4_RS02390 | Not Available | Positive | 541681 - 544953 | 122962.0 |
| circularly permuted type 2 atp-grasp protein | PPUTUW4_RS02395 | P9WL97 | Positive | 545042 - 547528 | 92735.2 |
| transglutaminase family protein | PPUTUW4_RS02400 | Not Available | Positive | 547528 - 548418 | 33473.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.




