Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas sp. UW4 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere of common reeds |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Brassica napus, Medicago lupulina |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1236535 bp
Thymine Count
1233428 bp
Guanine Count
1854724 bp
Cytosine Count
1858701 bp
Genome Length
6183388 bp
Protein-coding Genes
5507 genes
Non-Coding Genes
98 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| oligoribonuclease | PPUTUW4_RS02255 | Q4KJ81 | Positive | 510392 - 510934 | 20585.4 |
| trimeric intracellular cation channel family protein | PPUTUW4_RS02260 | P0AGM3 | Positive | 511120 - 511731 | 22403.3 |
| trna epoxyqueuosine(34) reductase queg | PPUTUW4_RS02265 | Q9HUL4 | Negative | 511851 - 512915 | 39546.5 |
| nad(p)h-hydrate dehydratase | PPUTUW4_RS02270 | Q83CM5 | Positive | 512979 - 514478 | 51186.0 |
| trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex atpase subunit type 1 tsae | PPUTUW4_RS02275 | P0AF68 | Positive | 514466 - 514936 | 17148.6 |
| n-acetylmuramoyl-l-alanine amidase | PPUTUW4_RS02280 | P63884 | Positive | 514940 - 516367 | 50353.4 |
| dna mismatch repair endonuclease mutl | PPUTUW4_RS02285 | C3KDW1 | Positive | 516364 - 518274 | 70160.9 |
| trna (adenosine(37)-n6)-dimethylallyltransferase miaa | PPUTUW4_RS02290 | Q3KIZ0 | Positive | 518274 - 519245 | 35783.3 |
| rna chaperone hfq | PPUTUW4_RS02295 | Q3KIY9 | Positive | 519339 - 519599 | 9384.34 |
| ribosome rescue gtpase hflx | PPUTUW4_RS02300 | P25519 | Positive | 519612 - 520913 | 49024.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.




