Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas sp. UW4 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere of common reeds |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Brassica napus, Medicago lupulina |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1236535 bp
Thymine Count
1233428 bp
Guanine Count
1854724 bp
Cytosine Count
1858701 bp
Genome Length
6183388 bp
Protein-coding Genes
5507 genes
Non-Coding Genes
98 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphoserine phosphatase serb | PPUTUW4_RS02205 | Q9S281 | Positive | 500285 - 501499 | 43777.9 |
| archaetidylserine decarboxylase | PPUTUW4_RS02210 | C3KDM6 | Negative | 501630 - 502490 | 31421.1 |
| rhodanese-like domain-containing protein | PPUTUW4_RS02215 | P52197 | Negative | 502500 - 503324 | 29922.6 |
| hdod domain-containing protein | PPUTUW4_RS02220 | Not Available | Negative | 503367 - 504905 | 57584.7 |
| flagellar motor stator protein mota | PPUTUW4_RS02225 | P55891 | Positive | 505073 - 505924 | 30325.2 |
| flagellar motor protein motb | PPUTUW4_RS02230 | P55892 | Positive | 505928 - 506956 | 37331.4 |
| toll/interleukin-1 receptor domain-containing protein | PPUTUW4_RS02235 | Not Available | Negative | 507196 - 507687 | 18555.1 |
| caspase family protein | PPUTUW4_RS02240 | Not Available | Negative | 507687 - 508646 | 35070.8 |
| tir domain-containing protein | PPUTUW4_RS02245 | Not Available | Negative | 508649 - 509056 | 15204.3 |
| small ribosomal subunit biogenesis gtpase rsga | PPUTUW4_RS02250 | Q3KIZ8 | Negative | 509254 - 510285 | 37329.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.




