Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas sp. UW4 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere of common reeds |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Brassica napus, Medicago lupulina |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1236535 bp
Thymine Count
1233428 bp
Guanine Count
1854724 bp
Cytosine Count
1858701 bp
Genome Length
6183388 bp
Protein-coding Genes
5507 genes
Non-Coding Genes
98 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ycek/yidq family lipoprotein | PPUTUW4_RS02055 | Not Available | Positive | 463483 - 463818 | 11830.4 |
| carbamoyltransferase | PPUTUW4_RS02060 | P74178 | Positive | 463985 - 465742 | 65524.7 |
| glycosyltransferase | PPUTUW4_RS02065 | Q81ST7 | Positive | 465726 - 466856 | 41351.9 |
| antimicrobial resistance protein mig-14 | PPUTUW4_RS02070 | Not Available | Positive | 466856 - 467752 | 33935.7 |
| pig-l deacetylase family protein | PPUTUW4_RS02075 | Not Available | Positive | 467761 - 469203 | 54308.8 |
| glycosyltransferase family 4 protein | PPUTUW4_RS02080 | Not Available | Positive | 469200 - 470354 | 43496.7 |
| glycosyltransferase | PPUTUW4_RS02085 | P22639 | Positive | 470351 - 471235 | 33894.9 |
| bifunctional o-antigen ligase/aminoglycoside phosphotransferase family protein | PPUTUW4_RS02090 | Q9HUG6 | Negative | 471308 - 473170 | 69735.1 |
| lipid a export permease/atp-binding protein msba | PPUTUW4_RS02095 | Q3KJ31 | Positive | 473325 - 475127 | 66296.0 |
| bifunctional d-glycero-beta-d-manno-heptose-7-phosphate kinase/d-glycero-beta-d-manno-heptose 1-phosphate adenylyltransferase hlde | PPUTUW4_RS02100 | Q3KJ28 | Positive | 475304 - 476728 | 50053.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.




