Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas sp. UW4 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere of common reeds |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Brassica napus, Medicago lupulina |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1236535 bp
Thymine Count
1233428 bp
Guanine Count
1854724 bp
Cytosine Count
1858701 bp
Genome Length
6183388 bp
Protein-coding Genes
5507 genes
Non-Coding Genes
98 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| terc family protein | PPUTUW4_RS00155 | P43932 | Positive | 32413 - 33180 | 28384.8 |
| na/pi cotransporter family protein | PPUTUW4_RS00160 | Q8X5Z7 | Positive | 33474 - 35132 | 60099.5 |
| pitrilysin family protein | PPUTUW4_RS00165 | Not Available | Positive | 35189 - 36565 | 51030.1 |
| duf5924 family protein | PPUTUW4_RS00170 | Not Available | Positive | 36796 - 37824 | 38682.7 |
| abc transporter permease | PPUTUW4_RS00175 | P73009 | Positive | 37879 - 39027 | 40552.2 |
| abc transporter atp-binding protein | PPUTUW4_RS00180 | P30769 | Positive | 39024 - 39827 | 28615.7 |
| mlad family protein | PPUTUW4_RS00185 | Not Available | Positive | 39829 - 40767 | 33438.1 |
| abc-type transport auxiliary lipoprotein family protein | PPUTUW4_RS00190 | Not Available | Positive | 40764 - 41390 | 22754.2 |
| glutamine synthetase | PPUTUW4_RS30090 | Not Available | Negative | 41409 - 41486 | 2734.32 |
| had family hydrolase | PPUTUW4_RS00195 | Q9I767 | Negative | 41522 - 42169 | 24470.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.




